mvSLOUCH: Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses

Fits multivariate Ornstein-Uhlenbeck types of models to continues trait data from species related by a common evolutionary history. See K. Bartoszek, J, Pienaar, P. Mostad, S. Andersson, T. F.Hansen (2012) <doi:10.1016/j.jtbi.2012.08.005>. The suggested PCMBaseCpp package (which significantly speeds up the likelihood calculations) can be obtained from <https://github.com/venelin/PCMBaseCpp/>.

Version: 2.6.5
Depends: R (≥ 3.5.0), abind
Imports: ape (≥ 5.3), graphics, methods, mvtnorm, Matrix, matrixcalc, ouch, PCMBase (≥ 1.2.10), stats, TreeSim
Suggests: PCMBaseCpp (≥ 0.1.9), geiger, ggplot2, knitr, rdryad (≥ 1.0.0), rmarkdown
Published: 2021-06-03
Author: Krzysztof Bartoszek [cre, aut], Jesualdo Fuentes-Gonzalez [ctb], Jason Pienaar [ctb]
Maintainer: Krzysztof Bartoszek <krzbar at protonmail.ch>
License: GPL-2 | GPL-3 | file LICENCE [expanded from: GPL (≥ 2) | file LICENCE]
NeedsCompilation: no
Citation: mvSLOUCH citation info
CRAN checks: mvSLOUCH results

Downloads:

Reference manual: mvSLOUCH.pdf
Vignettes: Getting started
Package source: mvSLOUCH_2.6.5.tar.gz
Windows binaries: r-devel: mvSLOUCH_2.6.5.zip, r-release: mvSLOUCH_2.6.5.zip, r-oldrel: mvSLOUCH_2.6.5.zip
macOS binaries: r-release (arm64): mvSLOUCH_2.6.4.tgz, r-release (x86_64): mvSLOUCH_2.6.5.tgz, r-oldrel: mvSLOUCH_2.6.5.tgz
Old sources: mvSLOUCH archive

Reverse dependencies:

Reverse imports: pcmabc
Reverse suggests: GLSME, PCMBase

Linking:

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