CRAN Package Check Results for Package ADAPTS

Last updated on 2021-05-10 07:48:04 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.6 6.20 90.45 96.65 OK
r-devel-linux-x86_64-debian-gcc 1.0.6 4.56 68.41 72.97 OK
r-devel-linux-x86_64-fedora-clang 1.0.6 128.78 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.6 121.74 OK
r-devel-windows-ix86+x86_64 1.0.6 14.00 130.00 144.00 NOTE
r-devel-windows-x86_64-gcc10-UCRT 1.0.6 ERROR
r-patched-linux-x86_64 1.0.6 5.25 88.22 93.47 OK
r-patched-solaris-x86 1.0.6 158.60 NOTE
r-release-linux-x86_64 1.0.6 5.84 85.89 91.73 OK
r-release-macos-x86_64 1.0.6 ERROR
r-release-windows-ix86+x86_64 1.0.6 8.00 96.00 104.00 NOTE
r-oldrel-macos-x86_64 1.0.6 ERROR
r-oldrel-windows-ix86+x86_64 1.0.6 9.00 9.00 18.00 ERROR

Check Details

Version: 1.0.6
Check: installed package size
Result: NOTE
     installed size is 7.6Mb
     sub-directories of 1Mb or more:
     doc 7.1Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 1.0.6
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'DeconRNASeq'
Flavors: r-devel-windows-x86_64-gcc10-UCRT, r-release-macos-x86_64

Version: 1.0.6
Check: examples
Result: ERROR
    Running examples in 'ADAPTS-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: estCellPercent.DeconRNASeq
    > ### Title: DeconRNASeq deconvolution
    > ### Aliases: estCellPercent.DeconRNASeq
    >
    > ### ** Examples
    >
    > #This toy example
    > library(ADAPTS)
    > fullLM22 <- ADAPTS::LM22[1:30, 1:4]
    > smallLM22 <- fullLM22[1:25,]
    >
    > cellEst <- estCellPercent.DeconRNASeq(refExpr=smallLM22, geneExpr=fullLM22)
    Loading required namespace: DeconRNASeq
    Failed with error: 'there is no package called 'DeconRNASeq''
    estCellPercent.DeconRNASeq requires DeconRNASeq
    https://www.bioconductor.org/packages/release/bioc/html/DeconRNASeq.html
    Error in estCellPercent.DeconRNASeq(refExpr = smallLM22, geneExpr = fullLM22) :
     DeconRNASeq not installed
    Execution halted
Flavors: r-devel-windows-x86_64-gcc10-UCRT, r-release-macos-x86_64

Version: 1.0.6
Check: package dependencies
Result: ERROR
    Package required but not available: ‘WGCNA’
    
    Package suggested but not available for checking: ‘DeconRNASeq’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-oldrel-macos-x86_64

Version: 1.0.6
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-oldrel-windows-ix86+x86_64